#Compile with matlab r2013a linux how to
#Compile with matlab r2013a linux software
#Compile with matlab r2013a linux code

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#Compile with matlab r2013a linux software

run_testjob.sh $MCRROOT > matlabresults.txt exitcode=$? #Copy results from the temporary directory #back to the home directory of the grid job mv matlabresults.A guide to uninstall MATLAB R2013a (32-bit) from your systemMATLAB R2013a (32-bit) is a software application. #!/bin/sh echo 'Hello Matlab!' #copy data to temporary directory jobdir=`pwd` cp -r * $TMPDIR/ cd $TMPDIR #set execution permissions for the matlab script and executable chmod u+x run_testjob.sh chmod u+x testjob. In this example the command script could look like following. The results must also be copied back to the original job directory when the actual matlab task has finished.

To do this, the execution script must have steps where the input data is coped to $TMPDIR and the process is moves to the $TMPDIR before the actual execution of the Matlab task. In cases where large amounts of Matlab jobs are submitted it is advices to run the actual matlab task in the local temporary directory ($TMPDIR) of the computing node.

#Compile with matlab r2013a linux code

The possible arguments of the Matlab code are added to the execution command after this. When the MCR-R2013A Runtime Environment is used, this location is stored to environment variable: $MCRROOT. The location of the MCR library must be given as the first argument for execution script. After this the compiled Matlab code is launched using the execution script ( run_testjob.sh). In the command script ( matlabrun.sh) execution permissions must first be defined for the compiled command and execution script. In this sample case we don't have any input files so the job description file ( matlab.xrsl) could look like following: & (executable=matlabrun.sh) (jobname=matlab) (stdout=std_1.out) (stderr=std_1.err) (walltime=4h) (memory=1052) (runtimeenvironment='APPS/MATH/MCR-R2013A') (inputfiles= ( 'testjob' 'testjob' ) ( 'run_testjob.sh' 'run_testjob.sh' ) ) (outputfiles= ( 'matlabresults.txt' 'matlabresults.txt' ) ) These components, as well as any input files that the Matlab code uses, needs to be defined as input files in the grid job description file.

The conversion command produces C executable ( testjob) and a shell scrip ( run_testjob.sh) that can be used to launch the executable. MCR-R2013A Runtime Environment supports c-converted Matlab codes that have been created with the mcc command of Matlab version R2013A (other Matlab versions are not compatible with the Runtime Environment).This Matlab version is available in the server of CSC.ДЄ simple Matlab code ( testjob.m) is converted to C exeutable with command: ( download the sample case from here): mcc -mv testjob.m When Matlab code is executed this way it does not require license and thus large amounts of C converted Matlab codes can be executed simultaneously. This executable can be used in FGI when the Matlab Compiler Runtime (MCR) is available. However, many Matlab codes can be translated to C coded executables. Due to licensing issues Matlab can't be directly use in the FGI environment.